After installing argtable (at least according to your instructions), I try the following command: $ wget -qO- clustal-omega-1.2.1.tar.gz The result I get is: -bash: clustal-omega-1.2.1.tar.gz: Permission denied I am not sure what is the cause of this, I might have to figure out whether I have permission or not. Thank you so much for this, I am beginning to think I have been denied access somehow.
Clustal X Download For Mac FreeĬlustal Omega is now in /usr/local/bin: $ which clustalo /usr/local/bin/clustalo $ clustalo -version 1.2.1. $ cd clustal-omega-1.2.1 $./configure CFLAGS='-I/usr/local/include' LDFLAGS='-L/usr/local/lib' -prefix='/usr/local'. Once argtable is installed, download source for Clustal Omega, unpack it and compile it: $ wget -qO- clustal-omega-1.2.1.tar.gz $ tar zxvf clustal-omega-1.2.1.tar.gz.
Use Homebrew to install argtable: $ brew install argtable 4. Once the CLT are installed, install Homebrew: $ ruby -e '$(curl -fsSL 3. Or you can just download and install CLT. If you are on OS X Yosemite, you might use to set up the CLT. If you are on OS X Mavericks, you can install the command-line tools directly via the Terminal. Install Xcode and then install the command-line utilities, which adds Clang and Clang and related tools (basically, the equivalent of the GCC compiler kit for the purposes of compiling and building C and C projects). Configure: error: in `/Users/lab/clustalo': configure: error: C compiler cannot create executables See `config.log' for more details. I followed this answer to actually get Xcode because I use 10.9.3, basically up until sudo make install It looks ok, I get the following output: $ xcode-select -install xcode-select: note: install requested for command line developer tools I try to configure the clustalo file again and I get the exact same error.Ĭhecking for C compiler default output file name. However, to run this in terminal, I have to install argtable2. I am downloading the following file from the Clustal Omega website. Having little experience in Command Line, I am stumped on practically the first step. 60 wrote: Hello Everyone, I have a very basic question. Both downloads come precompiled for many operating systems like. Neither are new tools, but are updated and improved versions of the previous implementations seen above. Clustal2 is the packaged release of both the command-line ClustalW and graphical Clustal X. The unique ID for this app's bundle is de.embl.clustal. The actual developer of this free Mac application is embl. Download clustalx 2.1 for Mac from our software library for free.